miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|161548259|gb|EY921127.1|EY921127 GTGGGCCGGTTAGAGGACTCGCTATCCGGCTTGGCCGCCTCCGGATCCTCGGTGGATCTGACGGCGAAGCTGGCCAAGTA
CGTGGCCAGCTTCACCTGTCGGATGGCGTTCGGGCTGAGTTTCGTCGGGAGCGGGATGGACAACGAGAGGTTTCTCGAGA
TCTTCACGGAGGCGAACAGGGTGATCGGGAAGTTCGCGGCGGAGGATATTTTTCCGGTGTTTGGGTGGGTCGTTGATCGG
GTCTCGGGGCTTGAGGGTAGCAGGAGGAAGAGCTTTCGAGCTCTGGACACGTTTTACCAGAAAGCTATTGAGGATCATCG
AGAGAAGAAGAGGACTGGGGGAGATGAGCGTGAAGATCTTATTGACGTGTTGCTCAAGCTACAGAGTCAAGAAACCAAAC
TCGGGTCTACGCGGATCACTGATAAACACATCAGAGCCATTCTTATGGATTTATTTGTAGCAGGCATAGACACATCTGCA
ATAACAATGGATTGGACAATGGCTGAGATTGCAAGACACCCAAGGGTGATGAAGAAAGTACAAACCGAGATACGTGAGCG
TGTAGGAGACAAGGGAAAAGTGACATACGAGGATCTCGAAGGCCTAGAGTACATGAAAATGGTGATCAAGGAGACTTGGA
GGTTACATGCACCGAGTCCGATTCTTATTCCAAGAGAGGCAATGTCGAGATTCAAGATCAAGGGCTATGACATATACCCG
GACACGGATCATGTAACACATGGGCTATGGACGTAGCCCTGATGTGTGAAGATCTGATG




Most similar to sp|O65787|C71B6_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O65787|C71B6_ARATH Cytochrome P450 71B6 OS=Arabidopsis thaliana
           GN=CYP71B6 PE=2 SV=1
          Length = 503

 Score =  380 bits (977), Expect = e-105
 Identities = 188/225 (83%), Positives = 206/225 (91%)
 Frame = +1

Query: 52  VDLTAKLAKYVASFTCRMAFGLSFVGSGMDNERFLEIFTEANRVIGKFAAEDIFPVFGWV 231
           VDLTA LAK+VASFTCRMAFGLSF GSGMDNE FLE+FTEANRVIGKFAA DIFP FGW+
Sbjct: 173 VDLTANLAKFVASFTCRMAFGLSFQGSGMDNETFLELFTEANRVIGKFAAADIFPGFGWI 232

Query: 232 VDRVSGLEGSRRKSFRALDTFYQKAIEDHREKKRTGGDEREDLIDVLLKLQSQETKLGST 411
           +DR+SGL+ SRRKSF+ LDTFYQKAI DHREKK+T  ++REDLIDVLLKLQSQETKLGS+
Sbjct: 233 LDRISGLDSSRRKSFQDLDTFYQKAIVDHREKKKT--EDREDLIDVLLKLQSQETKLGSS 290

Query: 412 RITDKHIRAILMDLFVAGIDTSAITMDWTMAEIARHPRVMKKVQTEIRERVGDKGKVTYE 591
           RITD HIRAI+MDLFVAG+DTS IT+DWTMAE++RHPRVMKKVQ EIRE VGDKG VTY+
Sbjct: 291 RITDTHIRAIIMDLFVAGVDTSVITLDWTMAELSRHPRVMKKVQAEIREHVGDKGIVTYD 350

Query: 592 DLEGLEYMKMVIKETWRLHAPSPILIPREAMSRFKIKGYDIYPDT 726
           DLE L YMKMVIKETWRLHAPSPILIPREAM+ FKIKGYDIYP T
Sbjct: 351 DLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGT 395